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  • DBD2BS: connecting a DNA-binding protein with its binding sites
  • E1DS: predicting catalytic sites based on 1-dimensional signatures
  • PRASA: an integrated web server that analyzes protein interaction types
  • Prote2s: predicting protein secondary structures
  • seeMotif: exploring and visualizing sequence motifs in 3D structures
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  • ProteDNA: Predictor of sequence-specific DNA-binding residues in transcription factors
  • MAGIIC-PRO: discovering functional long motifs that are interleaved by several large irregular gaps